Genomic Location: Contig00014:25851...60562
NR annotation: CAB3993967.1, DNA polymerase theta-like [Paramuricea clavata]
Species abbreviation PPAPI · all data for this species · gene families
| CDS |
| Ppa0G022760 |
| Transcript |
| Ppa0G022760 |
| Protein |
| Ppa0G022760 |
| UniProt accession | Description |
|---|---|
| O75417 | DNA polymerase theta OS=Homo sapiens OX=9606 GN=POLQ PE=1 SV=2 |
| Q8CGS6 | DNA polymerase theta OS=Mus musculus OX=10090 GN=Polq PE=1 SV=2 |
| O18475 | DNA polymerase theta OS=Drosophila melanogaster OX=7227 GN=PolQ PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004235 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04739 all species → | AMPKBI | 5'-AMP-activated protein kinase beta subunit, interaction domain | Family | Interproscan |
| PF16561 all species → | AMPK1_CBM | Glycogen recognition site of AMP-activated protein kinase | Family | Interproscan |
| PF20470 all species → | HTH_61 | Helix-turn-helix domain | Domain | Interproscan |
| PF21099 all species → | POLQ_helical | DNA_pol_Q helicase like region helical domain | Domain | Interproscan |
| PF00270 all species → | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
| PF00476 all species → | DNA_pol_A | DNA polymerase family A | Family | Interproscan |
| PF00271 all species → | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006828 all species → | Domain | Association with the SNF1 complex (ASC) domain | Interproscan |
| IPR014001 all species → | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR002298 all species → | Family | DNA polymerase A | Interproscan |
| IPR032640 all species → | Domain | AMP-activated protein kinase, glycogen-binding domain | Interproscan |
| IPR013783 all species → | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR046931 all species → | Domain | DNA polymerase theta-like, helix-turn-helix domain | Interproscan |
| IPR043502 all species → | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR001098 all species → | Domain | DNA-directed DNA polymerase, family A, palm domain | Interproscan |
| IPR048960 all species → | Domain | POLQ-like, helical domain | Interproscan |
| IPR011545 all species → | Domain | DEAD/DEAH box helicase domain | Interproscan |
| IPR001650 all species → | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR037256 all species → | Homologous_superfamily | ASC domain superfamily | Interproscan |
| IPR014756 all species → | Homologous_superfamily | Immunoglobulin E-set | Interproscan |
| IPR036397 all species → | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR019760 all species → | Conserved_site | DNA-directed DNA polymerase, family A, conserved site | Interproscan |
| IPR012337 all species → | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10133 all species → | DNA POLYMERASE I | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0003887 all species → | Molecular Function | DNA-directed DNA polymerase activity | Interproscan |
| GO:0006261 all species → | Biological Process | DNA-templated DNA replication | Interproscan |
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0006260 all species → | Biological Process | DNA replication | Interproscan |
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005524 all species → | Molecular Function | ATP binding | Interproscan |
| GO:0006302 all species → | Biological Process | double-strand break repair | Interproscan |
| GO:0097681 all species → | Biological Process | double-strand break repair via alternative nonhomologous end joining | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K02349 | POLQ; DNA polymerase theta | EC:2.7.7.7 | DNA repair and recombination proteins | ko03400 | deepkoala |