Gene detail

Detailed information of Ppa0G026940 in Paragorgia papillata

Genomic Location: Contig00015:3201660...3203244
NR annotation: XP_028401365.1, vang-like protein 2 [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q90Z05	Vang-like protein 2-B OS=Xenopus laevis OX=8355 GN=vangl2-b PE=1 SV=1
Q91ZD4	Vang-like protein 2 OS=Mus musculus OX=10090 GN=Vangl2 PE=1 SV=3
P84889	Vang-like protein 2 OS=Rattus norvegicus OX=10116 GN=Vangl2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009093 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06638 all species →	Strabismus	Strabismus protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009539 all species →	Family	Vang-like protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20886 all species →	VANG-LIKE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0001736 all species →	Biological Process	establishment of planar polarity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007275 all species →	Biological Process	multicellular organism development	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0060071 all species →	Biological Process	Wnt signaling pathway, planar cell polarity pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04510	VANGL; vang-like	-	Wnt signaling pathway	ko04310	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.