Gene detail

Detailed information of Ppa0G028850 in Paragorgia papillata

Genomic Location: Contig00015:6630062...6632095
NR annotation: CAB3999118.1, Gamma-secretase subunit PEN-2 [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6QI68	Gamma-secretase subunit PEN-2 OS=Rattus norvegicus OX=10116 GN=Psenen PE=3 SV=1
Q86BE9	Gamma-secretase subunit pen-2 OS=Drosophila melanogaster OX=7227 GN=pen-2 PE=1 SV=3
Q8JHF0	Gamma-secretase subunit PEN-2 OS=Danio rerio OX=7955 GN=psenen PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010243 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10251 all species →	PEN-2	Presenilin enhancer-2 subunit of gamma secretase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019379 all species →	Family	Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16318 all species →	GAMMA-SECRETASE SUBUNIT PEN-2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0070765 all species →	Cellular Component	gamma-secretase complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06170	PSENEN, PEN2; presenilin enhancer 2	-	Alzheimer disease	ko05010	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.