Detailed information of Ppa0G030000 in Paragorgia papillata

Genomic Location: Contig00015:9415848...9433876
NR annotation: CAB3984341.1, Rho guanine nucleotide exchange factor 7, partial [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q14155Rho guanine nucleotide exchange factor 7 OS=Homo sapiens OX=9606 GN=ARHGEF7 PE=1 SV=2
Q9ES28Rho guanine nucleotide exchange factor 7 OS=Mus musculus OX=10090 GN=Arhgef7 PE=1 SV=2
O55043Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001570 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00621
all species →
RhoGEFRhoGEF domainDomainInterproscan
PF00018
all species →
SH3_1SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000219
all species →
DomainDbl homology (DH) domainInterproscan
IPR011993
all species →
Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR001452
all species →
DomainSH3 domainInterproscan
IPR035899
all species →
Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR036028
all species →
Homologous_superfamilySH3-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46026
all species →
RHO-TYPE GUANINE NUCLEOTIDE EXCHANGE FACTOR, ISOFORM FInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005085
all species →
Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G030000.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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