Genomic Location: Contig00015:12936935...12947264
NR annotation: XP_028412811.1, collagen alpha-1(XVII) chain-like [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families
| CDS |
| Ppa0G031810 |
| Transcript |
| Ppa0G031810 |
| Protein |
| Ppa0G031810 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000886 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01391 all species → | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF00229 all species → | TNF | TNF(Tumour Necrosis Factor) family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008160 all species → | Repeat | Collagen triple helix repeat | Interproscan |
| IPR008983 all species → | Homologous_superfamily | Tumour necrosis factor-like domain superfamily | Interproscan |
| IPR021184 all species → | Conserved_site | Tumour necrosis factor, conserved site | Interproscan |
| IPR006052 all species → | Domain | Tumour necrosis factor domain | Interproscan |
| IPR051748 all species → | Family | Tumor Necrosis Factor Ligand Superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15151 all species → | PROTEIN EIGER | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0005164 all species → | Molecular Function | tumor necrosis factor receptor binding | Interproscan |
| GO:0006955 all species → | Biological Process | immune response | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0005615 all species → | Cellular Component | extracellular space | Interproscan |
| GO:0048018 all species → | Molecular Function | receptor ligand activity | Interproscan |
Ppa0G031810.
