Genomic Location: Contig00015:13678473...13699787
NR annotation: CAB4015740.1, E3 ubiquitin- ligase RNF130 [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families
| CDS |
| Ppa0G032290 |
| Transcript |
| Ppa0G032290 |
| Protein |
| Ppa0G032290 |
| UniProt accession | Description |
|---|---|
| Q8VEM1 | E3 ubiquitin-protein ligase RNF130 OS=Mus musculus OX=10090 GN=Rnf130 PE=2 SV=1 |
| Q6Y290 | E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus OX=10116 GN=Rnf130 PE=1 SV=1 |
| Q86XS8 | E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens OX=9606 GN=RNF130 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007045 (this species only) |
| Ubiquitin family | E3|E3 activity RING|RING · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02225 all species → | PA | PA domain | Family | Interproscan |
| PF13639 all species → | zf-RING_2 | Ring finger domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR003137 all species → | Domain | PA domain | Interproscan |
| IPR001841 all species → | Domain | Zinc finger, RING-type | Interproscan |
| IPR046450 all species → | Homologous_superfamily | PA domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46539 all species → | E3 UBIQUITIN-PROTEIN LIGASE ATL42 | Interproscan |
Ppa0G032290. This gene does have a gene model — the search simply returned no hit.Ppa0G032290.
