Detailed information of Ppa0G039840 in Paragorgia papillata

Genomic Location: Contig00026:1252697...1259666
NR annotation: XP_028405893.1, BRCA1-associated protein-like [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q99MP8BRCA1-associated protein OS=Mus musculus OX=10090 GN=Brap PE=1 SV=1
Q7Z569BRCA1-associated protein OS=Homo sapiens OX=9606 GN=BRAP PE=1 SV=2
O80996BRAP2 RING ZnF UBP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BRIZ2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003415 (this species only)
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species
Ubiquitin familyUBD|ZnF|ZnF_UBP · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639
all species →
zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR047243
all species →
DomainBRCA1-associated protein, RING finger, H2 subclassInterproscan
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR001607
all species →
DomainZinc finger, UBP-typeInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24007
all species →
BRCA1-ASSOCIATED PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0007265
all species →
Biological ProcessRas protein signal transductionInterproscan
GO:0016567
all species →
Biological Processprotein ubiquitinationInterproscan
GO:0061630
all species →
Molecular Functionubiquitin protein ligase activityInterproscan
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G039840.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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