Gene detail

Detailed information of Ppa0G047600 in Paragorgia papillata

Genomic Location: Contig00029:3811360...3811932
NR annotation: CAB4016832.1, dynactin subunit 6 [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7SGU3	Dynactin subunit 6 OS=Nematostella vectensis OX=45351 GN=dctn6 PE=3 SV=1
Q148G7	Dynactin subunit 6 OS=Bos taurus OX=9913 GN=DCTN6 PE=2 SV=1
O00399	Dynactin subunit 6 OS=Homo sapiens OX=9606 GN=DCTN6 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009407 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00132 all species →	Hexapep	Bacterial transferase hexapeptide (six repeats)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011004 all species →	Homologous_superfamily	Trimeric LpxA-like superfamily	Interproscan
IPR001451 all species →	Repeat	Hexapeptide repeat	Interproscan
IPR027777 all species →	Family	Dynactin subunit 6	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13072 all species →	DYNACTIN 6	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005869 all species →	Cellular Component	dynactin complex	Interproscan
GO:0007052 all species →	Biological Process	mitotic spindle organization	Interproscan
GO:0070840 all species →	Molecular Function	dynein complex binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10428	DCTN6; dynactin 6	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.