Detailed information of Ppa0G047640 in Paragorgia papillata

Genomic Location: Contig00029:3828030...3829987
NR annotation: CAB4000057.1, Fanconi anemia core complex-associated 24-like [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2KHY5Fanconi anemia core complex-associated protein 24 OS=Bos taurus OX=9913 GN=FAAP24 PE=2 SV=1
Q9BTP7Fanconi anemia core complex-associated protein 24 OS=Homo sapiens OX=9606 GN=FAAP24 PE=1 SV=2
A5FM03UvrABC system protein C OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / BCRC 14874 / CCUG 350202 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=uvrC PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003635 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12826
all species →		HHH_2Helix-hairpin-helix motifMotifInterproscan
PF17949
all species →		PNDFANCM pseudonuclease domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041663
all species →		DomainDisA/LigA, helix-hairpin-helix motifInterproscan
IPR040646
all species →		DomainFanconi anemia core complex-associated protein 24, pseudonuclease domainInterproscan
IPR010994
all species →		Homologous_superfamilyRuvA domain 2-likeInterproscan
IPR026985
all species →		FamilyFanconi anemia-associated protein of 24kDaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31786
all species →		FANCONI ANEMIA CORE COMPLEX-ASSOCIATED PROTEIN 24Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003682
all species →		Molecular Functionchromatin bindingInterproscan
GO:0036297
all species →		Biological Processinterstrand cross-link repairInterproscan
GO:0043240
all species →		Cellular ComponentFanconi anaemia nuclear complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10898FAAP24; fanconi anemia-associated protein-DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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