Gene detail

Detailed information of Ppa0G048540 in Paragorgia papillata

Genomic Location: Contig00029:4666286...4668457
NR annotation: CAB3990188.1, cytochrome b-245 light chain [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O46521	Cytochrome b-245 light chain OS=Bos taurus OX=9913 GN=CYBA PE=2 SV=3
Q95L73	Cytochrome b-245 light chain OS=Bison bison OX=9901 GN=CYBA PE=2 SV=3
Q61462	Cytochrome b-245 light chain OS=Mus musculus OX=10090 GN=Cyba PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007935 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05038 all species →	Cytochrom_B558a	Cytochrome Cytochrome b558 alpha-subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007732 all species →	Family	Cytochrome b558 alpha-subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15168 all species →	CYTOCHROME B-245 LIGHT CHAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0020037 all species →	Molecular Function	heme binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08009	CYBA, P22PHOX; cytochrome b-245, alpha polypeptide	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.