Gene detail

Detailed information of Ppa0G049990 in Paragorgia papillata

Genomic Location: Contig00037:75510...83359
NR annotation: CAB4012267.1, Retrovirus-related Pol poly from transposon 412 [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O08859	Tumor necrosis factor-inducible gene 6 protein OS=Mus musculus OX=10090 GN=Tnfaip6 PE=1 SV=1
P98066	Tumor necrosis factor-inducible gene 6 protein OS=Homo sapiens OX=9606 GN=TNFAIP6 PE=1 SV=2
P98065	Tumor necrosis factor-inducible gene 6 protein OS=Oryctolagus cuniculus OX=9986 GN=TNFAIP6 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00589	Phage_integrase	Phage integrase family	Family	Interproscan
PF00431	CUB	CUB domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002104	Domain	Integrase, catalytic domain	Interproscan
IPR013762	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan
IPR052925	Family	Phage Integrase-like Recombinase	Interproscan
IPR000859	Domain	CUB domain	Interproscan
IPR035914	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan
IPR011010	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR34605	PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan