Detailed information of Ppa0G061360 in Paragorgia papillata

Genomic Location: Contig00063:927460...954887
NR annotation: CAB4006876.1, deleted in malignant brain tumors 1 -like, partial, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q24JV9Galectin-3-binding protein A OS=Danio rerio OX=7955 GN=lgals3bpa PE=2 SV=1
Q6NY73Galectin-3-binding protein B OS=Danio rerio OX=7955 GN=lgals3bpb PE=2 SV=1
Q5RFW0Scavenger receptor class A member 5 OS=Danio rerio OX=7955 GN=scara5 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR001190DomainSRCR domainInterproscan
IPR050149FamilyCollagen superfamilyInterproscan
IPR017448DomainSRCR-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24023COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan

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