Gene detail

Detailed information of Ppa0G066880 in Paragorgia papillata

Genomic Location: Contig00080:134125...140974
NR annotation: XP_001632450.3, cysteine dioxygenase type 1 [Nematostella vectensis]
Species abbreviation PPAPI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6NWZ9	Cysteine dioxygenase type 1 OS=Danio rerio OX=7955 GN=cdo1 PE=2 SV=1
Q16878	Cysteine dioxygenase type 1 OS=Homo sapiens OX=9606 GN=CDO1 PE=1 SV=2
Q5RBQ7	Cysteine dioxygenase type 1 OS=Pongo abelii OX=9601 GN=CDO1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006272 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05995 all species →	CDO_I	Cysteine dioxygenase type I	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011051 all species →	Homologous_superfamily	RmlC-like cupin domain superfamily	Interproscan
IPR014710 all species →	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan
IPR010300 all species →	Family	Cysteine dioxygenase type I	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12918 all species →	CYSTEINE DIOXYGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005506 all species →	Molecular Function	iron ion binding	Interproscan
GO:0016702 all species →	Molecular Function	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	Interproscan
GO:0008198 all species →	Molecular Function	ferrous iron binding	Interproscan
GO:0017172 all species →	Molecular Function	cysteine dioxygenase activity	Interproscan
GO:0019448 all species →	Biological Process	L-cysteine catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00456	CDO1; cysteine dioxygenase	EC:1.13.11.20	Taurine and hypotaurine metabolism	ko00430	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.