Gene detail

Detailed information of Ppa0G075130 in Paragorgia papillata

Genomic Location: Contig00088:429975...443305
NR annotation: CAB4014359.1, gamma-butyrobetaine dioxygenase-like isoform X2 [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A5DCB6	Trimethyllysine dioxygenase OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=PGUG_00921 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06155	GBBH-like_N	Gamma-butyrobetaine hydroxylase-like, N-terminal	Domain	Interproscan
PF02668	TauD	Taurine catabolism dioxygenase TauD, TfdA family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050411	Family	Alpha-ketoglutarate-dependent hydroxylases	Interproscan
IPR038492	Homologous_superfamily	GBBH-like, N-terminal domain superfamily	Interproscan
IPR042098	Homologous_superfamily	Taurine dioxygenase TauD-like superfamily	Interproscan
IPR010376	Domain	Gamma-butyrobetaine hydroxylase-like, N-terminal	Interproscan
IPR003819	Domain	TauD/TfdA-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10696	GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0045329	Biological Process	carnitine biosynthetic process	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00471	BBOX1; gamma-butyrobetaine dioxygenase	EC:1.14.11.1	Lysine degradation	ko00310	deepkoala