Detailed information of Ppa0G081160 in Paragorgia papillata

Genomic Location: Contig00101:1794584...1797750
NR annotation: no NCBI-NR hit recorded
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Pfam domain
No Pfam domain signature was detected for Ppa0G081160. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR051644
all species →		FamilyTRAMP complex component and AT-rich DNA-binding proteinInterproscan
IPR036514
all species →		Homologous_superfamilySGNH hydrolase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46543
all species →		ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0031499
all species →		Cellular ComponentTRAMP complexInterproscan
GO:0043629
all species →		Biological Processobsolete ncRNA polyadenylationInterproscan
GO:0071031
all species →		Biological Processnuclear mRNA surveillance of mRNA 3'-end processingInterproscan
GO:0071035
all species →		Biological Processnuclear polyadenylation-dependent rRNA catabolic processInterproscan
GO:0071036
all species →		Biological Processnuclear polyadenylation-dependent snoRNA catabolic processInterproscan
GO:0071037
all species →		Biological Processnuclear polyadenylation-dependent snRNA catabolic processInterproscan
GO:0071038
all species →		Biological ProcessTRAMP-dependent tRNA surveillance pathwayInterproscan
GO:0071039
all species →		Biological Processnuclear polyadenylation-dependent CUT catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G081160.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP