Detailed information of Ppa0G089990 in Paragorgia papillata

Genomic Location: Contig00109:6908078...6928376
NR annotation: CAB4031023.1, deleted in malignant brain tumors 1 -like, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q95218Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Oryctolagus cuniculus OX=9986 GN=Dmbt1 PE=1 SV=2
Q24JV9Galectin-3-binding protein A OS=Danio rerio OX=7955 GN=lgals3bpa PE=2 SV=1
Q2VLH6Scavenger receptor cysteine-rich type 1 protein M130 OS=Mus musculus OX=10090 GN=Cd163 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR050686FamilySRCR-S1 Scavenger ReceptorInterproscan
IPR001190DomainSRCR domainInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR044925Homologous_superfamilyHis-Me finger superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48071SRCR DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan

TOP