Genomic Location: Contig00111:3088070...3095281
NR annotation: CAB3992123.1, ATP-dependent DNA helicase PIF1 [Paramuricea clavata]
| CDS | ||||
| Ppa0G093500 | ||||
| Transcript |
| Ppa0G093500 |
| Protein |
| Ppa0G093500 |
| Uniprot term | Description | |||
|---|---|---|---|---|
| Q5AXT5 | ATP-dependent DNA helicase PIF1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pif1 PE=3 SV=2 | |||
| Q9QSK3 | Uncharacterized protein 030L OS=Invertebrate iridescent virus 6 OX=176652 GN=IIV6-030L PE=3 SV=1 | |||
| Q0P9V4 | ATP-dependent DNA helicase Pif1 OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) OX=192222 GN=pif1 PE=1 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | DUB|OTU|OTU |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03372 | Exo_endo_phos | Endonuclease/Exonuclease/phosphatase family | Domain | Interproscan |
| PF02338 | OTU | OTU-like cysteine protease | Family | Interproscan |
| PF05970 | PIF1 | PIF1-like helicase | Family | Interproscan |
| PF14214 | Helitron_like_N | Helitron helicase-like domain at N-terminus | Family | Interproscan |
| PF20209 | DUF6570 | Domain of unknown function (DUF6570) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036691 | Homologous_superfamily | Endonuclease/exonuclease/phosphatase superfamily | Interproscan |
| IPR005135 | Domain | Endonuclease/exonuclease/phosphatase | Interproscan |
| IPR003323 | Domain | OTU domain | Interproscan |
| IPR010285 | Family | DNA helicase Pif1-like | Interproscan |
| IPR025476 | Domain | Helitron helicase-like domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR046700 | Domain | Domain of unknown function DUF6570 | Interproscan |
| IPR051055 | Family | PIF1 DNA helicase | Interproscan |
| IPR003593 | Domain | AAA+ ATPase domain | Interproscan |
| IPR038765 | Homologous_superfamily | Papain-like cysteine peptidase superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47642 | ATP-DEPENDENT DNA HELICASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0000723 | Biological Process | telomere maintenance | Interproscan |
| GO:0003678 | Molecular Function | DNA helicase activity | Interproscan |
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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