Detailed information of Ppa0G099680 in Paragorgia papillata

Genomic Location: Contig00115:1692771...1702483
NR annotation: CAB4012736.1, epsilon-sarcoglycan isoform X1 [Paramuricea clavata]
Species abbreviation PPAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O70258Epsilon-sarcoglycan OS=Mus musculus OX=10090 GN=Sgce PE=1 SV=2
Q29S03Epsilon-sarcoglycan OS=Bos taurus OX=9913 GN=SGCE PE=2 SV=3
Q5RAP2Epsilon-sarcoglycan OS=Pongo abelii OX=9601 GN=SGCE PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005522 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05510
all species →
Sarcoglycan_2Sarcoglycan alpha/epsilon N-terminal domainDomainInterproscan
PF20989
all species →
Sarcoglycan_2_CSarcoglycan alpha/epsilon second domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048346
all species →
DomainSarcoglycan alpha/epsilon, N-terminal domainInterproscan
IPR008908
all species →
FamilySarcoglycan alpha/epsilonInterproscan
IPR048347
all species →
DomainSarcoglycan alpha/epsilon second domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10132
all species →
ALPHA-/EPSILON-SARCOGLYCAN FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016012
all species →
Cellular Componentsarcoglycan complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G099680.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP