Detailed information of Ppa0G105420 in Paragorgia papillata

Genomic Location: Contig00126:15828...17728
NR annotation: CAB3991071.1, 39S ribosomal L20, mitochondrial-like [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B0K3L3Large ribosomal subunit protein bL20 OS=Thermoanaerobacter sp. (strain X514) OX=399726 GN=rplT PE=3 SV=1
B0K8B5Large ribosomal subunit protein bL20 OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=rplT PE=3 SV=1
Q8R9C4Large ribosomal subunit protein bL20 OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=rplT PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005439 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00453
all species →		Ribosomal_L20Ribosomal protein L20FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049946
all species →		Conserved_siteLarge ribosomal subunit protein bL20, conserved siteInterproscan
IPR005813
all species →		FamilyLarge ribosomal subunit protein bL20Interproscan
IPR035566
all species →		Homologous_superfamilyRibosomal protein bL20, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10986
all species →		39S RIBOSOMAL PROTEIN L20Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0019843
all species →		Molecular FunctionrRNA bindingInterproscan
GO:0000027
all species →		Biological Processribosomal large subunit assemblyInterproscan
GO:0005761
all species →		Cellular Componentmitochondrial ribosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G105420.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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