Genomic Location: Contig00126:2804634...2808894
NR annotation: XP_028394154.1, cleavage stimulation factor subunit 1-like [Dendronephthya gigantea]
| CDS | |||||
| Ppa0G107250 | |||||
| Transcript |
| Ppa0G107250 |
| Protein |
| Ppa0G107250 |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| Q05048 | Cleavage stimulation factor subunit 1 OS=Homo sapiens OX=9606 GN=CSTF1 PE=1 SV=1 | ||||
| Q5R8K2 | Cleavage stimulation factor subunit 1 OS=Pongo abelii OX=9601 GN=CSTF1 PE=2 SV=1 | ||||
| Q99LC2 | Cleavage stimulation factor subunit 1 OS=Mus musculus OX=10090 GN=Cstf1 PE=1 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16699 | CSTF1_dimer | Cleavage stimulation factor subunit 1, dimerisation domain | Domain | Interproscan |
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR044633 | Family | Cleavage stimulation factor subunit 1-like | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR032028 | Domain | Cleavage stimulation factor subunit 1, dimerisation domain | Interproscan |
| IPR038184 | Homologous_superfamily | CSTF1, dimerization domain superfamily | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR44133 | CLEAVAGE STIMULATION FACTOR SUBUNIT 1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005848 | Cellular Component | mRNA cleavage stimulating factor complex | Interproscan |
| GO:0031124 | Biological Process | mRNA 3'-end processing | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14406 | CSTF1; cleavage stimulation factor subunit 1 | - | Messenger RNA biogenesis | ko03019 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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