Genomic Location: Contig00129:1219906...1221143
NR annotation: CAB4002070.1, E3 ubiquitin- ligase RNF146 [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families
| CDS |
| Ppa0G107820 |
| Transcript |
| Ppa0G107820 |
| Protein |
| Ppa0G107820 |
| UniProt accession | Description |
|---|---|
| Q7ZUK0 | E3 ubiquitin-protein ligase rnf146 OS=Danio rerio OX=7955 GN=rnf146 PE=2 SV=1 |
| Q3T139 | E3 ubiquitin-protein ligase RNF146-B OS=Bos taurus OX=9913 GN=RNF146B PE=2 SV=1 |
| D2H0Y8 | E3 ubiquitin-protein ligase RNF146 OS=Ailuropoda melanoleuca OX=9646 GN=RNF146 PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006895 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02825 all species → | WWE | WWE domain | Family | Interproscan |
| PF13920 all species → | zf-C3HC4_3 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR044110 all species → | Domain | RNF146, RING finger, HC subclass | Interproscan |
| IPR004170 all species → | Domain | WWE domain | Interproscan |
| IPR037197 all species → | Homologous_superfamily | WWE domain superfamily | Interproscan |
| IPR033509 all species → | Family | E3 ubiquitin-protein ligase RNF146 | Interproscan |
| IPR001841 all species → | Domain | Zinc finger, RING-type | Interproscan |
| IPR018123 all species → | Domain | WWE domain, subgroup | Interproscan |
| IPR017907 all species → | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13417 all species → | UNCHARACTERIZED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004842 all species → | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0006511 all species → | Biological Process | ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0016055 all species → | Biological Process | Wnt signaling pathway | Interproscan |
| GO:0061630 all species → | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| GO:0072572 all species → | Molecular Function | poly-ADP-D-ribose binding | Interproscan |
| GO:0008270 all species → | Molecular Function | zinc ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K15700 | RNF146; E3 ubiquitin-protein ligase RNF146 | EC:2.3.2.27 | Ubiquitin system | ko04121 | deepkoala |
