Detailed information of Ppa0G114020 in Paragorgia papillata

Genomic Location: Contig00136:226109...229504
NR annotation: CAB4005246.1, rRNA-processing UTP23 homolog [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9BRU9rRNA-processing protein UTP23 homolog OS=Homo sapiens OX=9606 GN=UTP23 PE=1 SV=2
Q9CX11rRNA-processing protein UTP23 homolog OS=Mus musculus OX=10090 GN=Utp23 PE=2 SV=1
Q08DU1rRNA-processing protein UTP23 homolog OS=Bos taurus OX=9913 GN=UTP23 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007054 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04900
all species →		Fcf1Fcf1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029060
all species →		Homologous_superfamilyPIN-like domain superfamilyInterproscan
IPR006984
all species →		FamilyrRNA-processing protein Fcf1/Utp23Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12416
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0032040
all species →		Cellular Componentsmall-subunit processomeInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0070181
all species →		Molecular Functionsmall ribosomal subunit rRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14773UTP23; U3 small nucleolar RNA-associated protein 23-Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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