Gene detail

Detailed information of Ppa0G117170 in Paragorgia papillata

Genomic Location: Contig00143:226169...227507
NR annotation: CAB3984166.1, Prefoldin subunit 1 [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O60925	Prefoldin subunit 1 OS=Homo sapiens OX=9606 GN=PFDN1 PE=1 SV=2
Q5RAM7	Prefoldin subunit 1 OS=Pongo abelii OX=9601 GN=PFDN1 PE=2 SV=1
Q3SZE2	Prefoldin subunit 1 OS=Bos taurus OX=9913 GN=PFDN1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009152 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01920 all species →	Prefoldin_2	Prefoldin subunit	Coiled-coil	Interproscan
PF06401 all species →	Alpha-2-MRAP_C	Alpha-2-macroglobulin RAP, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002777 all species →	Family	Prefoldin beta-like	Interproscan
IPR010483 all species →	Domain	Alpha-2-macroglobulin RAP, C-terminal	Interproscan
IPR009053 all species →	Homologous_superfamily	Prefoldin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20903 all species →	PREFOLDIN SUBUNIT 1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006457 all species →	Biological Process	protein folding	Interproscan
GO:0016272 all species →	Cellular Component	prefoldin complex	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0008201 all species →	Molecular Function	heparin binding	Interproscan
GO:0050750 all species →	Molecular Function	low-density lipoprotein particle receptor binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0044183 all species →	Molecular Function	protein folding chaperone	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09548	PFDN1; prefoldin subunit 1	-	Chaperones and folding catalysts	ko03110	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.