Gene detail

Detailed information of Ppa0G117340 in Paragorgia papillata

Genomic Location: Contig00143:594658...598813
NR annotation: CAB3993497.1, S-adenosylmethionine synthase-like [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P31153	S-adenosylmethionine synthase isoform type-2 OS=Homo sapiens OX=9606 GN=MAT2A PE=1 SV=1
Q4R924	S-adenosylmethionine synthase isoform type-2 OS=Macaca fascicularis OX=9541 GN=MAT2A PE=2 SV=1
Q3THS6	S-adenosylmethionine synthase isoform type-2 OS=Mus musculus OX=10090 GN=Mat2a PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001670 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02772 all species →	S-AdoMet_synt_M	S-adenosylmethionine synthetase, central domain	Domain	Interproscan
PF00438 all species →	S-AdoMet_synt_N	S-adenosylmethionine synthetase, N-terminal domain	Domain	Interproscan
PF02773 all species →	S-AdoMet_synt_C	S-adenosylmethionine synthetase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022629 all species →	Domain	S-adenosylmethionine synthetase, central domain	Interproscan
IPR022636 all species →	Homologous_superfamily	S-adenosylmethionine synthetase superfamily	Interproscan
IPR002133 all species →	Family	S-adenosylmethionine synthetase	Interproscan
IPR022628 all species →	Domain	S-adenosylmethionine synthetase, N-terminal	Interproscan
IPR022631 all species →	Conserved_site	S-adenosylmethionine synthetase, conserved site	Interproscan
IPR022630 all species →	Domain	S-adenosylmethionine synthetase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11964 all species →	S-ADENOSYLMETHIONINE SYNTHETASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004478 all species →	Molecular Function	methionine adenosyltransferase activity	Interproscan
GO:0006556 all species →	Biological Process	S-adenosylmethionine biosynthetic process	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00789	metK, MAT; S-adenosylmethionine synthetase	EC:2.5.1.6	Biosynthesis of various plant secondary metabolites	ko00999	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.