Genomic Location: Contig00143:1288399...1322721
NR annotation: CAB3978527.1, Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families
| CDS |
| Ppa0G117690 |
| Transcript |
| Ppa0G117690 |
| Protein |
| Ppa0G117690 |
| UniProt accession | Description |
|---|---|
| Q6PFM0 | Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Danio rerio OX=7955 GN=jmjd6 PE=2 SV=2 |
| Q6GND3 | Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-A OS=Xenopus laevis OX=8355 GN=jmjd6-a PE=2 SV=1 |
| Q6NYC1 | Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 OS=Homo sapiens OX=9606 GN=JMJD6 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005035 (this species only) |
| Ubiquitin family | UBD|Other|SH3 · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07653 all species → | SH3_2 | Variant SH3 domain | Domain | Interproscan |
| PF03114 all species → | BAR | BAR domain | Domain | Interproscan |
| PF14604 all species → | SH3_9 | Variant SH3 domain | Domain | Interproscan |
| PF00018 all species → | SH3_1 | SH3 domain | Domain | Interproscan |
| PF00621 all species → | RhoGEF | RhoGEF domain | Domain | Interproscan |
| PF02373 all species → | JmjC | JmjC domain, hydroxylase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003347 all species → | Domain | JmjC domain | Interproscan |
| IPR001452 all species → | Domain | SH3 domain | Interproscan |
| IPR035899 all species → | Homologous_superfamily | Dbl homology (DH) domain superfamily | Interproscan |
| IPR004148 all species → | Domain | BAR domain | Interproscan |
| IPR036028 all species → | Homologous_superfamily | SH3-like domain superfamily | Interproscan |
| IPR027267 all species → | Homologous_superfamily | AH/BAR domain superfamily | Interproscan |
| IPR051492 all species → | Family | Dynamin-binding and Rho GEF | Interproscan |
| IPR000219 all species → | Domain | Dbl homology (DH) domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22834 all species → | NUCLEAR FUSION PROTEIN FUS2 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0005085 all species → | Molecular Function | guanyl-nucleotide exchange factor activity | Interproscan |
Ppa0G117690.
