Gene detail

Detailed information of Ppa0G120600 in Paragorgia papillata

Genomic Location: Contig00146:1206699...1211305
NR annotation: CAB4026655.1, CST complex subunit STN1 [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
D2GXY4	CST complex subunit STN1 OS=Ailuropoda melanoleuca OX=9646 GN=STN1 PE=3 SV=2
C1C4M3	CST complex subunit STN1 OS=Aquarana catesbeiana OX=8400 GN=stn1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007414 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10451 all species →	Stn1	Telomere regulation protein Stn1	Domain	Interproscan
PF09170 all species →	STN1_2	CST, complex subunit STN1, C terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR040260 all species →	Family	Replication factor A protein-like	Interproscan
IPR018856 all species →	Domain	CST complex subunit Stn1, N-terminal	Interproscan
IPR015253 all species →	Domain	Stn1, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13989 all species →	REPLICATION PROTEIN A-RELATED	Interproscan

Gene Ontology

No Gene Ontology signature was detected for Ppa0G120600. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23312	STN1; CST complex subunit STN1	-	DNA replication proteins	ko03032	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.