Gene detail

Detailed information of Ppa0G123150 in Paragorgia papillata

Genomic Location: Contig00153:1344631...1349917
NR annotation: XP_040577335.1, uncharacterized protein PB18E9.04c-like isoform X5 [Lepeophtheirus salmonis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O18733	Matrix metalloproteinase-9 OS=Canis lupus familiaris OX=9615 GN=MMP9 PE=2 SV=2
P41246	Matrix metalloproteinase-9 OS=Oryctolagus cuniculus OX=9986 GN=MMP9 PE=2 SV=1
Q90611	72 kDa type IV collagenase OS=Gallus gallus OX=9031 GN=MMP2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF00040	fn2	Fibronectin type II domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000562	Domain	Fibronectin type II domain	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR036943	Homologous_superfamily	Fibronectin type II domain superfamily	Interproscan
IPR051666	Family	Seminal Plasma Capacitation Regulator	Interproscan
IPR013806	Homologous_superfamily	Kringle-like fold	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22918	SEMINAL PLASMA PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008201	Molecular Function	heparin binding	Interproscan
GO:0009986	Cellular Component	cell surface	Interproscan
GO:0048240	Biological Process	sperm capacitation	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan