Gene detail

Detailed information of Ppa0G127580 in Paragorgia papillata

Genomic Location: Contig00158:710348...725322
NR annotation: CAB3977129.1, pyridine nucleotide-disulfide oxidoreductase domain-containing 2 [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Ppa0G127580

ATGATTTATATCACTATAAAAGTGCAAATTTTTAAATTGCTATTTATATATATCGTCTATGCTTTTTTAGTGGTGGTGGGTGGTATGGATGTTTCCTGGAACTATGTACACTATGCATTAATTGACATCGGAGGAGTTTTCCCTAAAATGGCTGCATATCTCCAAAAAGCAGGTCTTAATGTGTTAGTCCTTGAACGAAGGCATATCATTGGTGGAGCAGCTGTGACTGAAGAAATTGTTCCAGGGTTCAAATTTTCAAGAGCTTCTTATGTCCTCAGTTTGCTTAGGCCTCAAATTATCAATGATTTAGAACTCAAGAATTTTGGCCTGAAACTTTACTTTAGAGATCCGAATTATTTTACACCTTTAAAAGATGGACGATATCTACTCCTTGGATCAGATGATGAAAAAAATTATGAAGAAATTTCAAAATTTTCAAAACAAGATGCCAAAATGCTGCCAAAATATGAAGCTACTCTCAGCAGATTAGTTGAAGCAATTGGTCCTCTCTTGGATCATCCACCAGTCGACGTCGAAGCTTTGATAAAAGGCTCACTGCGTGAAAAAGTAGAAACACTTCCATCATTGAGAGCCTTGATGAGAACAACAAGAAAACTTGGAAAGGACTTACCTCTTTTTTACGACCTTGTGACCGCTCCAGCGACAAAGATAATTTTGGATAAATGGTTTGAATCGGAACCTTTGAAAGCTTGTCTGGCGATGGACTCGATAATCGGAGCGACTATTAGTCCTTCAAGTCCTGGAAGCGCTTATGTTCTTCTGCATCACGTCATGGGAGAACTTGATGGACGAAAGAGTGCTTGGGCGTACGTTGAAGGTGGAATGGGCAAGCTTTCTCAAGCAATTGCTGATTCTGCCTCGTCTAAAGGGGCCACGATAATGACTAACCAGCCAGTGAAATCGTTTCTTCTTGATCGCTCGTCAGACTCTGTTTGTGGTGTGGTTTTAGAAGATGGATCAGAAATCCAAGCTGACATTGTTCTTTCCAACGCGACTCCCAAAGTGACATTCTTGGACCTTCTTCCAAAGGGCGTTCTGTCAGATGAACTCCAAATGGATATCTCCGGTTTTCGCTATGATTCTCCAGTTACGAAAATCAATGTTGCTGTCGATAGATTACCGAACTTTCTCGCGCGCCCAAACAAGAAGTCTGGCGAGCCGTCAGCACACCACAGGTGTACTATCCACTATACAGATTCTATGGATAAGATTGAAAAAGCTTATTCAGACTGTCTACAAGGGAGAGCCTCGGACTGCCCATTGATTGAAATGTGTATCCCTTCATCTTTGGATCCAACCCTCGCGCCTGTCGGCTGTCACGTTATATCTCTCTTCACCCAGTACACGCCATACGAACTCAAGGATGCAACGTGGACTGATGAAAGACGAAATGCTTATGCAGACAAAGAACGACCGTCACCACTGAACGTTGGATCACCATTTTGTTTTCGGGACGAAAGAATGGCTTCATCACGCCTTCGTGTTATCCTCCTGGTCATCAATATCGCCTTGTGTTTATCCATAGAAGACCATTATGGCAGTGGGGGAAGCCCAACTGAGACTGATCCAACCTGGGCTAAACGTTTGACCCAACTGGCTTTAGCCGTCGCTCGAGCAACTTATTTACCGATTCCTGACAAGCACTTTCTGCGAAACGGTTCGATCATGGAGAACCCAGCGGATTTCAGCAAGGTCTCGTCTTGGTTGAAGTTGTGTTGGGGCTGTCCGCGCAACCATCCAGTCGAACAAGGAGCGCTGTGTTACAAAAGGTGTCCTAACGGTAAACCAAACGGCCGAACATTTCTCTGTTTCGGGAACTGTCCACAAGGCTACCGCAATCTTGGTCTCACGTGTTTACGCGATCTCGACATCCGTGCTGCCAAGAACAACAAGTGTCCGTGGTACGACAAGTGTGGACTCACGCTCTCGCGCGGCTGCTCGAAATGTCCCGCGGGATACAGAAATGACGGATGCACGTGCAGGCGAAATCCGCACGTCGTCGCGCGCCCGCGTTACAACAGGGGTATCGGTGTCGTCATGAGATCGTACGTCCGCGGAATCGGCCAGCTCCCGACGTTCTTCCGTTATGATCCGACAAGCGAGCGAGAGACGTGCCGCGTCAAAGGCTGGGTCGGGAAAGCATTCGTGAATGAGGATACGGAAGTGATCAAGTTCACGAACGATCGCCAGAAAATTGTCGTGTTTGGCTTTCGTGGAACTGACGTCACCAGCATCCGGGACTGGCTGACAAGCTTCAACATTCATCCGGTGGACTTTTGGTTAAATAACACAAAACTGACGATGCACCGCGGGTTTAAAAATAGATATGACAACATCGCGAATTGGTTCGAGAAAGAATTCCGCGCGGTCCCCTCGGATTATATGACCTTACTCACGGGTCATAGTTTGGGAGGTGCCGAGGCCAGTATCGCAGCCGTGTTTGCAGCCGGGAAACTGGGTCGAGCTCCAGACGCGGTGGTCACGTGGGGGAGTCCATTGGCAGGGGCGGAGAATTTTGTGAAGTTCTACAAAGAGATAATTGGGTGTGACGTCACGATGACTTACGTCACCAAGGGGGACTTAGTTGCAAATCTGCCGAAGGTTTACGGATATCGGCACGTCTGTGACATCGTCGAACTCGAACCTACGGCTACAAGCTTCTTTCCAGTTCACAGTCTGTACACAGGGTATGGAGATGGAGTGGAACGGAAATACGGCGATTCGGAGGAGATCAAACTCGGTTGCGATGTCCTCATGAAGAATGACGATAAATCAGAAGATGTTTTTGGATATTAA

Transcript

Ppa0G127580

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q68FT3	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Pyroxd2 PE=2 SV=1
Q5RAP5	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 OS=Pongo abelii OX=9601 GN=PYROXD2 PE=2 SV=1
Q8N2H3	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 OS=Homo sapiens OX=9606 GN=PYROXD2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0013400 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01764 all species →	Lipase_3	Lipase (class 3)	Family	Interproscan
PF01593 all species →	Amino_oxidase	Flavin containing amine oxidoreductase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036188 all species →	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR009030 all species →	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR002921 all species →	Domain	Fungal lipase-like domain	Interproscan
IPR002937 all species →	Domain	Amine oxidase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10668 all species →	PHYTOENE DEHYDROGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for Ppa0G127580.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.