Gene detail

Detailed information of Ppa0G127930 in Paragorgia papillata

Genomic Location: Contig00158:1415540...1416283
NR annotation: CAB4008730.1, Hypothetical predicted protein [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
E7FDB3	Nanos homolog 1 OS=Danio rerio OX=7955 GN=nanos1 PE=3 SV=1
Q80WY3	Nanos homolog 1 OS=Mus musculus OX=10090 GN=Nanos1 PE=2 SV=2
Q8WY41	Nanos homolog 1 OS=Homo sapiens OX=9606 GN=NANOS1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002643 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05741 all species →	zf-nanos	Nanos RNA binding domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008705 all species →	Family	Nanos/Xcat2	Interproscan
IPR024161 all species →	Domain	Zinc finger, nanos-type	Interproscan
IPR038129 all species →	Homologous_superfamily	Nanos domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12887 all species →	NANOS PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003729 all species →	Molecular Function	mRNA binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0017148 all species →	Biological Process	negative regulation of translation	Interproscan
GO:0048471 all species →	Cellular Component	perinuclear region of cytoplasm	Interproscan
GO:0048477 all species →	Biological Process	oogenesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18741	NANOS1, NOS1; protein nanos 1	-	Messenger RNA biogenesis	ko03019	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.