Gene detail

Detailed information of Ppa0G128590 in Paragorgia papillata

Genomic Location: Contig00158:2176208...2183495
NR annotation: XP_046851311.1, BTB/POZ domain-containing protein KCTD9-like [Xenia sp. Carnegie-2017]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7L273	BTB/POZ domain-containing protein KCTD9 OS=Homo sapiens OX=9606 GN=KCTD9 PE=1 SV=1
Q80UN1	BTB/POZ domain-containing protein KCTD9 OS=Mus musculus OX=10090 GN=Kctd9 PE=2 SV=1
A5PKG7	BTB/POZ domain-containing protein KCTD5 OS=Bos taurus OX=9913 GN=KCTD5 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001748 (this species only) · gene tree & orthology
Ubiquitin family	E3\|E3 adaptor Cullin RING\|BTB · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00805 all species →	Pentapeptide	Pentapeptide repeats (8 copies)	Repeat	Interproscan
PF11834 all species →	KHA	KHA, dimerisation domain of potassium ion channel	Family	Interproscan
PF02214 all species →	BTB_2	BTB/POZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000210 all species →	Domain	BTB/POZ domain	Interproscan
IPR001646 all species →	Repeat	Pentapeptide repeat	Interproscan
IPR021789 all species →	Domain	KHA domain	Interproscan
IPR051082 all species →	Family	Pentapeptide repeat and BTB/POZ domain-containing protein	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR011333 all species →	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR003131 all species →	Domain	Potassium channel tetramerisation-type BTB domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14136 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0051260 all species →	Biological Process	protein homooligomerization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21919	KCTD9; BTB/POZ domain-containing protein KCTD9	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.