Gene detail

Detailed information of Ppa0G128900 in Paragorgia papillata

Genomic Location: Contig00158:2635705...2646083
NR annotation: CAB3990006.1, transcription factor COE3 isoform X8 [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
O73742	Transcription factor COE3 OS=Xenopus laevis OX=8355 GN=coe3 PE=2 SV=2
P56721	Transcription factor collier OS=Drosophila melanogaster OX=7227 GN=kn PE=2 SV=2
Q8K4J2	Transcription factor COE4 OS=Mus musculus OX=10090 GN=Ebf4 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	COE

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16422	COE1_DBD	Transcription factor COE1 DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038173	Homologous_superfamily	Transcription factor COE, DNA-binding domain superfamily	Interproscan
IPR032200	Domain	Transcription factor COE, DNA-binding domain	Interproscan
IPR003523	Family	Transcription factor COE	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10747	TRANSCRIPTION FACTOR COE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09103	EBF, COE; early B-cell factor	-	Transcription factors	ko03000	deepkoala