Detailed information of Ppa0G134780 in Paragorgia papillata

Genomic Location: Contig00166:401596...415511
NR annotation: XP_028397288.1, 26S proteasome non-ATPase regulatory subunit 13-like [Dendronephthya gigantea]
Species abbreviation PPAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P8416926S proteasome non-ATPase regulatory subunit 13 OS=Gallus gallus OX=9031 GN=PSMD13 PE=1 SV=1
B0BN9326S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus OX=10116 GN=Psmd13 PE=1 SV=1
Q5E96426S proteasome non-ATPase regulatory subunit 13 OS=Bos taurus OX=9913 GN=PSMD13 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007337 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18261
all species →		Rpn9_CRpn9 C-terminal helixFamilyInterproscan
PF01399
all species →		PCIPCI domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000717
all species →		DomainProteasome component (PCI) domainInterproscan
IPR040798
all species →		DomainRpn9, C-terminal helixInterproscan
IPR035298
all species →		Family26S Proteasome non-ATPase regulatory subunit 13Interproscan
IPR036390
all species →		Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10539
all species →		26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005198
all species →		Molecular Functionstructural molecule activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006511
all species →		Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0008541
all species →		Cellular Componentproteasome regulatory particle, lid subcomplexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G134780.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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