Detailed information of Ppa0G137880 in Paragorgia papillata

Genomic Location: Contig00175:1665244...1677176
NR annotation: XP_028406975.1, collagen alpha-2(VI) chain-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O15232Matrilin-3 OS=Homo sapiens OX=9606 GN=MATN3 PE=1 SV=2
Q6UXI7Vitrin OS=Homo sapiens OX=9606 GN=VIT PE=1 SV=1
Q5EA64Cochlin OS=Bos taurus OX=9913 GN=COCH PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR050938FamilyCollagen and Collagen-like Structural ProteinsInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37456SI:CH211-266K2.1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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TOP