Gene detail

Detailed information of Ppa0G142920 in Paragorgia papillata

Genomic Location: Contig00187:180363...181579
NR annotation: XP_046844820.1, fructose-2,6-bisphosphatase TIGAR-like [Xenia sp. Carnegie-2017]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7ZVE3	Fructose-2,6-bisphosphatase TIGAR B OS=Danio rerio OX=7955 GN=tigarb PE=1 SV=2
Q9SCS3	Phosphoglycerate mutase-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At3g50520 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002846 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00300 all species →	His_Phos_1	Histidine phosphatase superfamily (branch 1)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013078 all species →	Family	Histidine phosphatase superfamily, clade-1	Interproscan
IPR051695 all species →	Family	Phosphoglycerate Mutase	Interproscan
IPR029033 all species →	Homologous_superfamily	Histidine phosphatase superfamily	Interproscan
IPR001345 all species →	Active_site	Phosphoglycerate/bisphosphoglycerate mutase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46517 all species →	FRUCTOSE-2,6-BISPHOSPHATASE TIGAR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004331 all species →	Molecular Function	fructose-2,6-bisphosphate 2-phosphatase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0043456 all species →	Biological Process	regulation of pentose-phosphate shunt	Interproscan
GO:0045820 all species →	Biological Process	negative regulation of glycolytic process	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14634	TIGAR; fructose-2,6-bisphosphatase	EC:3.1.3.46	Central carbon metabolism in cancer	ko05230	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.