Detailed information of Ppa0G155950 in Paragorgia papillata

Genomic Location: Contig00220:1389425...1404893
NR annotation: CAB4016142.1, Hemicentin-1, partial [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
G5ECS8A disintegrin and metalloproteinase with thrombospondin motifs adt-1 OS=Caenorhabditis elegans OX=6239 GN=adt-1 PE=2 SV=1
Q13591Semaphorin-5A OS=Homo sapiens OX=9606 GN=SEMA5A PE=1 SV=3
D3ZTD8Semaphorin-5A OS=Rattus norvegicus OX=10116 GN=Sema5a PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00051KringleKringle domainDomainInterproscan
PF01392FzFz domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038178Homologous_superfamilyKringle superfamilyInterproscan
IPR000001DomainKringleInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036790Homologous_superfamilyFrizzled cysteine-rich domain superfamilyInterproscan
IPR020067DomainFrizzled domainInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

TOP