Gene detail

Detailed information of Ppa0G158540 in Paragorgia papillata

Genomic Location: Contig00227:1308199...1310356
NR annotation: XP_028394927.1, mediator of RNA polymerase II transcription subunit 22-like [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q15528	Mediator of RNA polymerase II transcription subunit 22 OS=Homo sapiens OX=9606 GN=MED22 PE=1 SV=2
Q5E9K2	Mediator of RNA polymerase II transcription subunit 22 OS=Bos taurus OX=9913 GN=MED22 PE=2 SV=1
A5WUL3	Mediator of RNA polymerase II transcription subunit 22 OS=Danio rerio OX=7955 GN=med22 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007840 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06179 all species →	Med22	Surfeit locus protein 5 subunit 22 of Mediator complex	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009332 all species →	Family	Mediator of RNA polymerase II transcription subunit 22	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12434 all species →	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 22	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003712 all species →	Molecular Function	transcription coregulator activity	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0016592 all species →	Cellular Component	mediator complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15139	MED22; mediator of RNA polymerase II transcription subunit 22	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.