Detailed information of Ppa0G160340 in Paragorgia papillata

Genomic Location: Contig00229:741642...746200
NR annotation: XP_028407762.1, embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein-like isoform X1 [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6IND6Abasic site processing protein HMCES OS=Xenopus laevis OX=8355 GN=hmces PE=1 SV=1
Q6P7N4Abasic site processing protein HMCES OS=Xenopus tropicalis OX=8364 GN=hmces PE=2 SV=1
Q5ZJT1Abasic site processing protein HMCES OS=Gallus gallus OX=9031 GN=HMCES PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007145 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02586
all species →		SRAPSOS response associated peptidase (SRAP)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036590
all species →		Homologous_superfamilySOS response associated peptidase-likeInterproscan
IPR003738
all species →		FamilySOS response associated peptidase (SRAP)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13604
all species →		DC12-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003697
all species →		Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0006974
all species →		Biological ProcessDNA damage responseInterproscan
GO:0106300
all species →		Biological Processprotein-DNA covalent cross-linking repairInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G160340.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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