Detailed information of Ppa0G161970 in Paragorgia papillata

Genomic Location: Contig00232:859405...865910
NR annotation: XP_044174283.1, uncharacterized protein LOC122957905 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15299ALS2CR8Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8FamilyInterproscan
PF04434SWIMSWIM zinc fingerDomainInterproscan
PF02902Peptidase_C48Ulp1 protease family, C-terminal catalytic domainDomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF21056ZSWIM1-3_RNaseH-likeZinc finger SWIM domain-containing protein 1/3, RNaseH-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR003653DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR029309FamilyCalcium-responsive transcription factorInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR007527DomainZinc finger, SWIM-typeInterproscan
IPR048324DomainZSWIM1/3, RNaseH-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47456PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

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