Detailed information of Ppa0G164950 in Paragorgia papillata

Genomic Location: Contig00240:737262...740262
NR annotation: CAB4036854.1, Hypothetical predicted protein [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
F1QMV3Trafficking protein particle complex subunit 6b OS=Danio rerio OX=7955 GN=trappc6b PE=2 SV=1
Q32L78Trafficking protein particle complex subunit 6B OS=Bos taurus OX=9913 GN=TRAPPC6B PE=2 SV=1
Q86SZ2Trafficking protein particle complex subunit 6B OS=Homo sapiens OX=9606 GN=TRAPPC6B PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008011 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04051
all species →		TRAPPTransport protein particle (TRAPP) componentFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007194
all species →		FamilyTransport protein particle (TRAPP) componentInterproscan
IPR037992
all species →		FamilyTRAPP complex, Trs33 subunitInterproscan
IPR024096
all species →		Homologous_superfamilyNO signalling/Golgi transport ligand-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12817
all species →		TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6BInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005801
all species →		Cellular Componentcis-Golgi networkInterproscan
GO:0005802
all species →		Cellular Componenttrans-Golgi networkInterproscan
GO:0006888
all species →		Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0030008
all species →		Cellular ComponentTRAPP complexInterproscan
GO:0043087
all species →		Biological Processregulation of GTPase activityInterproscan
GO:0048193
all species →		Biological ProcessGolgi vesicle transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20304TRAPPC6, TRS33; trafficking protein particle complex subunit 6-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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