Gene detail

Detailed information of Ppa0G165540 in Paragorgia papillata

Genomic Location: Contig00240:1326372...1335809
NR annotation: CAB4009837.1, tectonin beta-propeller repeat-containing 2-like [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Ppa0G165540

ATGGAATCAAATCAAGAAGAGTGCTTTTTGGACGAGATCTTACAAGAACTTCCCAACCGTGTGGCGAAACCGACTCCTACAGTGAAAGGAAACAACCTGTCTGTTTCAAAGTTGTTTCATCAGATCAGTGATTCATTGAAAGACCTTCACCTGATCTACACATGCTTGGATGTATCGAGTGTAGCTATTGCACTTGGAACTAATGTTGGCAATGCATTTATTTATCAAAGAGTCAACAAGAAAATTTTAAAAATTTCCTCTGATACAAAGTATGTTCCAACTACTTGTATCAAGTTGGTTACTGGATGTGGAACCGTGGCTTTTGGTCATGAAACTGGGACATTTTCTGTTGGTTTAATAGATCCACCTATTGACAGAAAATTTGAGTCATTAACTGCAGAGGATATTCACCATTCTGCAGTCACGTGTTTAGAGTGGTCAACAGATGGCTTGATTCTATATACTGGTGACAGTAATGGGAAAATATCAATGTCTGTTGTCAAGATTTCTGAGGGCATTCTTCAGACAGCTATAATTATGAACGAAGATGCTAGTATTGTGCAGCTTTCTTATGGTCTTCATGCACTTCTCGCATCAAGTACAAAGCGCACAATACTTTGGTCCTTTCAGACTGAAAAGATAACCCAAGTTGGTGAAAAAGAAAGGAAGACTTCTGGTTCTTTTGGCTGTTGCTTCATTCCCAAGGACTTCCAAGAACCCTCTAAGAAACTTTACGCCGCACGACCCGGTCAACGAATATGGACGGCGGACGAAAGCGGCAAGGTCTCTTCAACATCCGTATTCAAACCTCTTTTGGGTGACAAGCCTCAAACTATCTACACCCTGACTGGTAACGACGGTAAAATGAACAGTGGAGGACAATTTAGTCTACTATTGATATACTACAACAAATTCGTTATCACCTGGGACCAAAACCACTTGTGGATCCTGGACCTTCAGGATGGCGTCGTCGTCGGTTGTCATAGCAATCTGGGGAAAATTCGTGACGTCGCGGTTTCGGGACACGAGGTATTCGTGTTGTTGAACCAACGGGAGAAATTTATGCGGCGGTTTGCTCTCGTTACTGAAACATTGGGGCCGTCGTGTTTAGACGCAGTTATAGCAACTCGCGATCATGAAGTCGCCGAAACTTCGCGCGAAGCTGATCAGTTTGAGGAAAGGAAATCTGGCAACGATATTGTCCTGCCTGCTGCTGGTAAAACAAGCTTTGACGATAATGATGGTCCTGATGTCTTTCAAAAAATTAATGCGATTCCTCTGGATTGTGGCAAAGGTGATATTGTGTTCACTGGCGTGAAGCGAAAGAAAAAGAAAAAGAAAGTTAAACAAGAACAGCCCGACACCTCAGAATTAACAACCAGCACGGTTCCATCTGATGGGTTAAAAGACGAGACATCCCTTGAAAGAACTGCATCACAAAATGAAACACCAGCTACCGAGAACGAAAGCAATCCACCATCTTTGGCCTCCGTCACGTTAAACGATACGAAAAGGGAAACTAGAGTTGAACCTCAGGAATGTACCACATCAGAAATTCAAGAAAGTTCGCCTGTGGTGTCAGGAAGCGAGGAAGACGAACCTCATACAGTTGTTCCTAATGAATTGACTATCGATATCCAAGAAAAATCGGGAGACTTAAAATCGTCCGACGAAGCTTCTAAACCTCAAATTTCGAATGACGATAGTTACACAGAATTGACCGACGAAGTAATGGAAACTTTGCAAGAACTAAACGAATCTCCGCAAACTCAAGTTTTGACTAACGAGAATTTGGAAGAACTTTCTTGCACGCGAGAGGAAAATGATAATGTTCTCACCGAACACGCTCACCAAGAAGCTACCGATAACGTTTCAACACCAACGACGTTCCTGGACGCACCAGATCTTGAATTATCACCCGTGAACGACAGCGGTGTTTCCACAGGCTCGGAGAGCAAGTTCCCGACCTCTCCACGACAAGAATCGACGGAATCTGGCGACGAATACCGAATACTGGACGTGTCATCGAACTACCTGCGAAGCGATAGTTACGAACCAGCTGATGAGCCTGCCAGCCCAGATGAGGTCAGGGAAAGCAAGGAGGGGGGAAATAAAGCTAAAACAACAAACGAGGACTATCACGTTCCGTTGTTTGCAGACACGTGGTCAAGTCGTGCCGCGCCCACGGTGCAGACAATCTCGAGTCTAGCACTTTCTCAGAAGTATGTATTTTGTTCGGACACGCGAGGTCAAGTTTACTACTCTGACCCCAGCACCGCGTCCTGTCACGGATGGGAACAAGTGGATTGGAAAGCAAATCAGATTTGTGTCGATAGTTCTTGTGATGTTATAAGCTACGTGGCGCAAGGTAACAAGGCGTTTATCCGTGCGAATGTGAGCGCTATGCACCCGGTTGGCAGTGAATCCTTTCAAATCATTGAAGATGTGTCTTCACTCGCGACCTGTTCTGTTTGCACGTGGATCATTACTATTTGGTGTTCCGAAGATTTCGTAGAAAACCTTTCTCAAATAGCTTGCTACAATACCGTGTTGTGGGGACGTACTTTGGATGACACATTATTTGTATATGCAGGACGCCCTGGTGGAAAAAAGGCTACGTGGAAGAAAATTGAAGAAAAGAAAGCAAAGTGGGTGACCATGAGCGACGACGGCACAGTGTGGATTATTACCCCGGATGACCAAATATGGTTCAACCCTGGCGTATCGACATCGAGCCCAACTGGAGAGGTCTGGTACCAAGTGACCTTGGGTCAGTACATCATCGACGACGACGCCTCGATCCTGGGTTCTACCGTCAGCTTCTTTCAGTCCGTGGGCTCAGCTTACCGCAACGCACGCACCACAGAGTACCTCCGTCACGCCGCTAAAGGTTTAATCCAATCGACAAAAGATATGGCGTGCTCCCTGTTCCGAGACGGCGGACACCCGAAGCAAATCTACTGCAATATGAAGAGTGGGGTATGGCTGCTGGACACGAAGAACACTTTACATGCTTGTCGCGGTCAGGTGACTGGTTCCTACTGGAAGCGCGTTTGTCCGACCGGTACAGCGCAATCGGCCACGTGGAGGCACGTGTCCACAGGTTTGGGGAGCTATGTTTGGGCTTTACAGCCGAACGGCGAGCTGACCTGCTTCAATCCCAACGGTCCTTCGTATAATGTCGAGGGTCCGTCTTCACAGGAAAGTCTGGATTACATCAGTAGTTCGCCGCACGGGGTCTGGTGCTTTTCCACCACGAACGGTACCAAAGTGTATATCCGTGACGGCATATCGGAAAGCTATCCGCAAGGTTTCGCGTGGACATCGTTGCCGTTAAGAGGCCAAGAAATTAAGAGTGTAAAACACCTCAGCGTCGGTGGAATCACGGTCTGGGCTGTGGATAACACTGGGAACGTGTGGATACGAATTGGGAGCGTGGGGGTTGACGAGTCGACGGTGTTGTCCCAAGCGTGGCTTCCATTGGATAATCCAGCAAATACCGAGCTCAGCACGATCGAAGTAAACGCCAAGGATTCCATGGTGTGGGCTACGGATACCAAGGGGAACGTGTTTGCTAGAGACGGGGTCAAAGAGGATTTCCTTGTCGGGACTGGCTGGAGGGAAGTCTCAGGAGCGCTGCTGAAGAGCGTGTGTCTCAGTTCGTGCGTAGTCTACGGCTTGTGCACCAACGGCGAAGTTGTATGCAGGTTCGGTGTGTCCCCGACGAACTGTGTTGGCGATTACTGGAAAAAGATCCCTGGACACTTTGTTCAAATGTCTGTCAACGGCGGAGGAGAGCTGTGGGGAATTAGCCAGGAGGATTGGCTGTTTGTTCGCAAGACCAAGTGTCTGTTTGGCAAAGTGGCATCGAAGGAAGAAAAGCAAGAAGTCACAAAGGAGAAAGTGAAGCAATTTGTGGACGATGTTGATGTTGCTGTTGACGACGTCGATGACGACGACGCCGATGGTGGGGACTGGGAATTATTGTGA

Transcript

Ppa0G165540

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005793 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06462 all species →	Hyd_WA	Propeller	Repeat	Interproscan
PF19193 all species →	Tectonin	Tectonin domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR006624 all species →	Repeat	Beta-propeller repeat TECPR	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23287 all species →	RUBY-EYE2-LIKE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0032527 all species →	Biological Process	protein exit from endoplasmic reticulum	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23881	TECPR2; tectonin beta-propeller repeat-containing protein 2	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.