Gene detail

Detailed information of Ppa0G171960 in Paragorgia papillata

Genomic Location: Contig00253:72456...74949
NR annotation: XP_028412038.1, mediator of RNA polymerase II transcription subunit 34-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P50729	Probable ATP-dependent DNA helicase RecS OS=Bacillus subtilis (strain 168) OX=224308 GN=recS PE=1 SV=1
Q9FT72	ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana OX=3702 GN=RECQL3 PE=1 SV=1
O93530	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Xenopus laevis OX=8355 GN=wrn PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13710	DNA HELICASE RECQ FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0000724	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005694	Cellular Component	chromosome	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006268	Biological Process	DNA unwinding involved in DNA replication	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0009378	Molecular Function	four-way junction helicase activity	Interproscan
GO:0032508	Biological Process	DNA duplex unwinding	Interproscan
GO:0043138	Molecular Function	3'-5' DNA helicase activity	Interproscan