Gene detail

Detailed information of Ppa0G180780 in Paragorgia papillata

Genomic Location: Contig00268:15275...22011
NR annotation: CAB3990106.1, Hypothetical predicted protein [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6ZM63	GPN-loop GTPase 3 OS=Danio rerio OX=7955 GN=gpn3 PE=2 SV=2
Q9D3W4	GPN-loop GTPase 3 OS=Mus musculus OX=10090 GN=Gpn3 PE=2 SV=1
Q9UHW5	GPN-loop GTPase 3 OS=Homo sapiens OX=9606 GN=GPN3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001940 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03029 all species →	ATP_bind_1	Conserved hypothetical ATP binding protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004130 all species →	Family	GPN-loop GTPase	Interproscan
IPR030228 all species →	Family	GPN-loop GTPase 3	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21231 all species →	XPA-BINDING PROTEIN 1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24104	GPN; GPN-loop GTPase	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.