Gene detail

Detailed information of Ppa0G181920 in Paragorgia papillata

Genomic Location: Contig00268:2047562...2061261
NR annotation: CAB3994006.1, disintegrin and metallo ase domain-containing 10 [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Ppa0G181920

ATGCTACTTTTATTTCACTATATGACAGTTCTGTTGTGTCTGTTTATATCGTTGCTAACGGAACGTCTGAATGAATTTGTATCCCATTTTGAGCCGCTCACCTACGACAGAAGCAACCTTGAACAAACTCACCGAAGAGTTCGTCGATCGTTGGACAAAGACGCCAGCCTTCATTTAGATTTCAAAGCCTATGGAAGGTCATTTAACTTAAGACTAAAAAGGGATACAACCATATTTGCTCCAAACTTCGAAGTTGAAAGTGAGTTTGATCCAGCAAAAGTTTACAAAGGACATGTTGATGGCCATCCTAATTCTATGGTGCATGGGTTTGTTCACGATGGTATATTTGAGGGCAAAATAAGGTTATCCGATGAACTACATGATGAATATCATGTTGAACCAAGCTCTGATCATTTTGATACACAAAGAGCTAAGGACTTTCATTCTGTTATGTACAAAGCTTCAGATCTTCATTATCCTTACGCTTACGGCAAAGATCTCGACTTGAGCGAAGAGACCAAAAAATGGATGGACGAAGCACGACGATTGCCAGACGAACATTTTTCTAATTCTGTGAAAGTAAAAAGAAATGTTCCTCATCGGTACAAACGGCAGACTAAAGAAGAAAAAGTGATTTGCCAAATTCACTTAAGAGCTGATCATTTATTTACAAAGCATAGAGCTCGTGGCAATAAGGAAAGAGCTCTGTTGCTTATGACAAAACATGTACAGGCTGTTCATGACATCTACAGGAATACTGTGTTTAAAATTAATGATGAAGATGAGGCAGGTTTTGGATTTGCTATCAAAAGAATGAGAGCAAACGACTCAAGTGATGCAGCTCAATCTAATAATTTATACGGCCAAGACTTCATTGGAGTTGAAAAATTCTTGGATATTGTTTCTTTGGAGAAAACTTCAACTGAGCAGAGTGCTCGATTCTGTTTATCTCATGTGTTTACTTATCGTGACTTTGAAGATGGTGTTCTTGGTTTAGCTTGGGTTGGAGAACCAGCGGGCAAAGCAGCTGGAGGTATTTGTGAAATAGCAAGACAGTACAGTGATGGTCGTAAAAAGACGTTAAATACTGGCGTCGTTACGTTTATCAACTACAATAAAGAAGTGCCGTCCAGAGTGTCTGAAGTTACCTTTGCTCATGAATTGGGACACAATTTTGGTTCTCAGCACGATTCTGGTAATTGTGGTGAAAATTCTAATGGCAACTTCATTATGTTTCCCAAAGCCACATCTGGAAACGATCCTAATAACAGAAAATTTTCAGATTGTAGTAGACGTTATATAGCACCTGTGATAGAGACTAAAAGAGATGAATGCTTTCAGACCACAAATGCGTCAATATGCGGCAACCAAGTGGTCGAAGATGGTGAAGAATGTGATTGTGGTTTCAAAAATGATTGTACAGACAAATGTTGTAACCATGCTGAGTCAAGCCTGGGATGTAAACGTCCTGTTGGTGTGCAGTGCAGCAGTGTAAAATGTCCTGATCCTGTGGAGAAGCCAAGTGAGACAACAGATTGTAATGATGATCGTAGTGTTTGTCTCGATGGCGAATGCAAGGGTTCGCGTTGTCTGAAATTCAAGAAACAGGAGTGCCAATGCGTGGAGGATAAGTACCAGTGTTCGTTGTGTTGCCATGGTGACGACAAAGTGTGTTTACCGTACAATACATCAGGAATGTCAATGTTAAAACCATTAGAGCTATTGGCCGGGGCACCGTGTAATGACTATGAAGGTTATTGCGACACACTTGGCAAGTGCAGAGGAGTTGATTCTGAGGGACCCCTAGAGAGGATCAAGAATTTACTGTTTGGCGGAGATGCTATTAATAATTTAGTGGACTGGGTCAAAACTTACTGGTGGGCTGCGATACTTATTGGAATTGGACTTATATTGCTAATGGCTGTATTTGTCAAGGTTTGCAGTGTCGCAACTCCAAGCAGTAATCCGAATAAACCGAAGGCAAAGACCTTGTCATTGCGTCGTCATCCACGCTCGAACCCAGGCTACTCTAATGAACCTCCGCCACCGTACGACATTGAAATGGCTGCAGTTCGGCAAGGTCGAAACGGTAGGCATTGA

Transcript

Ppa0G181920

Protein

Uniprot

Uniprot term	Description
Q10741	Disintegrin and metalloproteinase domain-containing protein 10 OS=Bos taurus OX=9913 GN=ADAM10 PE=1 SV=1
O77633	Disintegrin and metalloproteinase domain-containing protein 10 OS=Sus scrofa OX=9823 GN=ADAM10 PE=2 SV=2
O14672	Disintegrin and metalloproteinase domain-containing protein 10 OS=Homo sapiens OX=9606 GN=ADAM10 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01562	Pep_M12B_propep	Reprolysin family propeptide	Family	Interproscan
PF21299	ADAM10_Cys-rich	ADAM10, cysteine-rich domain	Domain	Interproscan
PF13574	Reprolysin_2	Metallo-peptidase family M12B Reprolysin-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002870	Domain	Peptidase M12B, propeptide	Interproscan
IPR049038	Domain	ADAM10, cysteine-rich domain	Interproscan
IPR036436	Homologous_superfamily	Disintegrin domain superfamily	Interproscan
IPR051489	Family	Disintegrin and Metalloproteinase Domain-Containing	Interproscan
IPR001590	Domain	Peptidase M12B, ADAM/reprolysin	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR001762	Domain	Disintegrin domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45702	ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006509	Biological Process	membrane protein ectodomain proteolysis	Interproscan
GO:0007219	Biological Process	Notch signaling pathway	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06704	ADAM10, CD156c; disintegrin and metalloproteinase domain-containing protein 10	EC:3.4.24.81	CD molecules	ko04090	deepkoala