Gene detail

Detailed information of Ppa0G182190 in Paragorgia papillata

Genomic Location: Contig00268:2495276...2499024
NR annotation: XP_028399509.1, protein mago nashi homolog [Dendronephthya gigantea]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O42149	Protein mago nashi homolog OS=Xenopus laevis OX=8355 GN=magoh PE=2 SV=1
Q9CQL1	Protein mago nashi homolog 2 OS=Mus musculus OX=10090 GN=Magohb PE=2 SV=1
Q3ZBV3	Protein mago nashi homolog OS=Bos taurus OX=9913 GN=MAGOH PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007516 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02792 all species →	Mago_nashi	Mago nashi protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036605 all species →	Homologous_superfamily	Mago nashi superfamily	Interproscan
IPR004023 all species →	Family	Mago nashi protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12638 all species →	PROTEIN MAGO NASHI HOMOLOG	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0008380 all species →	Biological Process	RNA splicing	Interproscan
GO:0035145 all species →	Cellular Component	exon-exon junction complex	Interproscan
GO:0071013 all species →	Cellular Component	catalytic step 2 spliceosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12877	MAGOH; protein mago nashi	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.