Gene detail

Detailed information of Ppa0G182200 in Paragorgia papillata

Genomic Location: Contig00268:2499153...2502321
NR annotation: CAB4008653.1, Histidine triad nucleotide-binding 1 [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P32084	Uncharacterized HIT-like protein Synpcc7942_1390 OS=Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805) OX=1140 GN=Synpcc7942_1390 PE=4 SV=1
P62958	Adenosine 5'-monophosphoramidase HINT1 OS=Bos taurus OX=9913 GN=HINT1 PE=1 SV=2
Q9D0S9	Adenosine 5'-monophosphoramidase HINT2 OS=Mus musculus OX=10090 GN=Hint2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001654 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01230 all species →	HIT	HIT domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019808 all species →	Conserved_site	Histidine triad, conserved site	Interproscan
IPR001310 all species →	Family	Histidine triad (HIT) protein	Interproscan
IPR011146 all species →	Domain	HIT-like domain	Interproscan
IPR036265 all species →	Homologous_superfamily	HIT-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23089 all species →	HISTIDINE TRIAD HIT PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02503	HINT1_2, hinT, hit; histidine triad (HIT) family protein	EC:3.9.1.-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.