Detailed information of Ppa0G188740 in Paragorgia papillata

Genomic Location: Contig00287:3123444...3147411
NR annotation: CAB3996608.1, polyketide synthase [Paramuricea clavata]
Species abbreviation PPAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O31782Polyketide synthase PksN OS=Bacillus subtilis (strain 168) OX=224308 GN=pksN PE=1 SV=3
A0A2I2F262PKS-NRPS hybrid synthetase acdB OS=Aspergillus candidus OX=41067 GN=acdB PE=1 SV=1
G3XNF4PKS-NRPS hybrid synthetase ATPKS OS=Aspergillus niger (strain ATCC 1015 / CBS 113.46 / FGSC A1144 / LSHB Ac4 / NCTC 3858a / NRRL 328 / USDA 3528.7) OX=380704 GN=ATPKS PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0016905 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00668
all species →
CondensationCondensation domainFamilyInterproscan
PF00109
all species →
ketoacyl-syntBeta-ketoacyl synthase, N-terminal domainDomainInterproscan
PF00698
all species →
Acyl_transf_1Acyl transferase domainDomainInterproscan
PF02801
all species →
Ketoacyl-synt_CBeta-ketoacyl synthase, C-terminal domainDomainInterproscan
PF08242
all species →
Methyltransf_12Methyltransferase domainDomainInterproscan
PF00550
all species →
PP-bindingPhosphopantetheine attachment siteDomainInterproscan
PF16197
all species →
KAsynt_C_assocKetoacyl-synthetase C-terminal extensionFamilyInterproscan
PF13193
all species →
AMP-binding_CAMP-binding enzyme C-terminal domainDomainInterproscan
PF00501
all species →
AMP-bindingAMP-binding enzymeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029063
all species →
Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR010033
all species →
DomainHAD-superfamily phosphatase, subfamily IIICInterproscan
IPR045851
all species →
Homologous_superfamilyAMP-binding enzyme, C-terminal domain superfamilyInterproscan
IPR050091
all species →
FamilyPolyketide and Nonribosomal Peptide Biosynthesis EnzymesInterproscan
IPR036736
all species →
Homologous_superfamilyACP-like superfamilyInterproscan
IPR001242
all species →
DomainCondensation domainInterproscan
IPR016039
all species →
Homologous_superfamilyThiolase-likeInterproscan
IPR009081
all species →
DomainPhosphopantetheine binding ACP domainInterproscan
IPR014030
all species →
DomainBeta-ketoacyl synthase, N-terminalInterproscan
IPR014043
all species →
DomainAcyl transferaseInterproscan
IPR020845
all species →
Conserved_siteAMP-binding, conserved siteInterproscan
IPR020841
all species →
DomainPolyketide synthase, beta-ketoacyl synthase domainInterproscan
IPR010037
all species →
DomainFkbH domainInterproscan
IPR023213
all species →
Homologous_superfamilyChloramphenicol acetyltransferase-like domain superfamilyInterproscan
IPR036412
all species →
Homologous_superfamilyHAD-like superfamilyInterproscan
IPR018201
all species →
Active_siteBeta-ketoacyl synthase, active siteInterproscan
IPR001227
all species →
Homologous_superfamilyAcyl transferase domain superfamilyInterproscan
IPR020806
all species →
DomainPolyketide synthase, phosphopantetheine-binding domainInterproscan
IPR014031
all species →
DomainBeta-ketoacyl synthase, C-terminalInterproscan
IPR013217
all species →
DomainMethyltransferase type 12Interproscan
IPR032821
all species →
DomainPolyketide synthase, C-terminal extensionInterproscan
IPR025110
all species →
DomainAMP-binding enzyme, C-terminal domainInterproscan
IPR023214
all species →
Homologous_superfamilyHAD superfamilyInterproscan
IPR006162
all species →
PTMPhosphopantetheine attachment siteInterproscan
IPR042099
all species →
Homologous_superfamilyANL, N-terminal domainInterproscan
IPR016035
all species →
Homologous_superfamilyAcyl transferase/acyl hydrolase/lysophospholipaseInterproscan
IPR000873
all species →
DomainAMP-dependent synthetase/ligase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43775
all species →
FATTY ACID SYNTHASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004312
all species →
Molecular Functionfatty acid synthase activityInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0006633
all species →
Biological Processfatty acid biosynthetic processInterproscan
GO:0071770
all species →
Biological ProcessDIM/DIP cell wall layer assemblyInterproscan
GO:0003824
all species →
Molecular Functioncatalytic activityInterproscan
GO:0016746
all species →
Molecular Functionacyltransferase activityInterproscan
GO:0004315
all species →
Molecular Function3-oxoacyl-[acyl-carrier-protein] synthase activityInterproscan
GO:0016740
all species →
Molecular Functiontransferase activityInterproscan
GO:0031177
all species →
Molecular Functionphosphopantetheine bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G188740.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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