Detailed information of Ppa0G198360 in Paragorgia papillata

Genomic Location: Contig00299:866810...875355
NR annotation: CAB3995613.1, stromal cell-derived factor 2-like [Paramuricea clavata]
Species abbreviation PPAPI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3SZ45Stromal cell-derived factor 2 OS=Bos taurus OX=9913 GN=SDF2 PE=2 SV=1
Q9DCT5Stromal cell-derived factor 2 OS=Mus musculus OX=10090 GN=Sdf2 PE=1 SV=1
Q99470Stromal cell-derived factor 2 OS=Homo sapiens OX=9606 GN=SDF2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007345 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02815
all species →		MIRMIR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016093
all species →		DomainMIR motifInterproscan
IPR036300
all species →		Homologous_superfamilyMir domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46809
all species →		STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for Ppa0G198360. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G198360.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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