Gene detail

Detailed information of Ppa0G200300 in Paragorgia papillata

Genomic Location: Contig00303:392778...401473
NR annotation: CAB4025478.1, hatching enzyme-like [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P07152	Stromelysin-2 OS=Rattus norvegicus OX=10116 GN=Mmp10 PE=2 SV=1
Q6Y4Q5	Stromelysin-1 OS=Canis lupus familiaris OX=9615 GN=MMP3 PE=2 SV=1
O55123	Stromelysin-2 OS=Mus musculus OX=10090 GN=Mmp10 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00413	Peptidase_M10	Matrixin	Domain	Interproscan
PF01549	ShK	ShK domain-like	Domain	Interproscan
PF01471	PG_binding_1	Putative peptidoglycan binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001818	Domain	Peptidase M10, metallopeptidase	Interproscan
IPR036365	Homologous_superfamily	PGBD-like superfamily	Interproscan
IPR003582	Domain	ShKT domain	Interproscan
IPR002477	Domain	Peptidoglycan binding-like	Interproscan
IPR021190	Family	Peptidase M10A	Interproscan
IPR033739	Domain	Peptidase M10A, catalytic domain	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR006026	Domain	Peptidase, metallopeptidase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10201	MATRIX METALLOPROTEINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan
GO:0030198	Biological Process	extracellular matrix organization	Interproscan
GO:0030574	Biological Process	collagen catabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07998	MMP19, MMP18; matrix metalloproteinase-19 (RASI)	EC:3.4.24.-	Peptidases and inhibitors	ko01002	deepkoala