Detailed information of Ppa0G200700 in Paragorgia papillata

Genomic Location: Contig00303:1033315...1035360
NR annotation: no NCBI-NR hit recorded
Species Paragorgia papillata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0065294 (this species only) · gene tree & orthology

 Pfam domain
No Pfam domain signature was recorded for Ppa0G200700 in Paragorgia papillata.
 InterPro
InterPro termTypeDescriptionSource
IPR050149
all species →		FamilyCollagen superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24023
all species →		COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005587
all species →		Cellular Componentcollagen type IV trimerInterproscan
GO:0005615
all species →		Cellular Componentextracellular spaceInterproscan
GO:0030020
all species →		Molecular Functionextracellular matrix structural constituent conferring tensile strengthInterproscan
GO:0030198
all species →		Biological Processextracellular matrix organizationInterproscan
GO:0031012
all species →		Cellular Componentextracellular matrixInterproscan
GO:0032836
all species →		Biological Processglomerular basement membrane developmentInterproscan
GO:0038063
all species →		Biological Processcollagen-activated tyrosine kinase receptor signaling pathwayInterproscan
GO:0062023
all species →		Cellular Componentcollagen-containing extracellular matrixInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for Ppa0G200700.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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