Gene detail

Detailed information of Ppa0G208120 in Paragorgia papillata

Genomic Location: Contig00314:1706300...1706830
NR annotation: CAB3997324.1, 39S ribosomal L40, mitochondrial [Paramuricea clavata]
Species Paragorgia papillata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9NQ50	Large ribosomal subunit protein mL40 OS=Homo sapiens OX=9606 GN=MRPL40 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009251 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09812 all species →	MRP-L28	Mitochondrial ribosomal protein L28	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019192 all species →	Family	Large ribosomal subunit protein mL40	Interproscan
IPR039145 all species →	Family	Large ribosomal subunit protein mL40, metazoa/plants	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13359 all species →	39S RIBOSOMAL PROTEIN L40, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005761 all species →	Cellular Component	mitochondrial ribosome	Interproscan
GO:0005762 all species →	Cellular Component	mitochondrial large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17421	MRPL40; large subunit ribosomal protein L40	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.